https://anderstorstensson.r-universe.devRecent package updates in anderstorstenssonR-universehttps://github.com/anderstorstensson.pnghttps://anderstorstensson.r-universe.devTue, 08 Sep 2026 04:44:03 GMTanders.torstensson@smhi.se (Anders Torstensson)Provides functions to retrieve, process, analyze, and quality-control marine physical, chemical, and biological data. The main focus is on Swedish monitoring data available through the 'SHARK' database <https://shark.smhi.se/en/>, with additional API support for 'Nordic Microalgae' <https://nordicmicroalgae.org/>, 'Dyntaxa' <https://artfakta.se/>, World Register of Marine Species ('WoRMS') <https://www.marinespecies.org>, 'AlgaeBase' <https://www.algaebase.org>, OBIS 'xylookup' web service <https://iobis.github.io/xylookup/> and Intergovernmental Oceanographic Commission (IOC) - UNESCO databases on harmful algae <https://www.marinespecies.org/hab/> and toxins <https://toxins.hais.ioc-unesco.org/>.https://github.com/r-universe/sharksmhi/actions/runs/37746280521Tue, 08 Sep 2026 04:44:03 GMTSHARK4R1.2.1successhttps://sharksmhi.r-universe.devhttps://github.com/sharksmhi/shark4rquality_control.Rmdquality_control.htmlQuality Control of SHARK Data2024-11-25 14:09:312026-03-12 11:20:12retrieve_nordic_microalgae_data.Rmdretrieve_nordic_microalgae_data.htmlRetrieve Data From Nordic Microalgae2024-11-19 06:05:092026-03-12 11:20:12retrieve_shark_data.Rmdretrieve_shark_data.htmlRetrieve Data From SHARK2024-11-15 10:58:042026-03-12 11:20:12retrieve_hab_data.Rmdretrieve_hab_data.htmlRetrieve HAB Data From IOC-UNESCO Databases2025-01-07 13:51:272026-06-08 20:05:57retrieve_worms_data.Rmdretrieve_worms_data.htmlRetrieve Taxonomic Data From WoRMS2024-11-20 15:55:072026-03-12 11:20:12anders.torstensson@smhi.se (Anders Torstensson)A comprehensive suite of tools for managing, processing, and analyzing data from the IFCB. I R FlowCytobot ('iRfcb') supports quality control, geospatial analysis, and preparation of IFCB data for publication in databases like <https://www.gbif.org>, <https://www.obis.org>, <https://emodnet.ec.europa.eu/en>, <https://shark.smhi.se/en/>, and <https://www.ecotaxa.org>. The package integrates with the MATLAB 'ifcb-analysis' tool, which is described in Sosik and Olson (2007) <doi:10.4319/lom.2007.5.204>, and provides features for working with raw, manually classified, and machine learning–classified image datasets. Key functionalities include image extraction, particle size distribution analysis, taxonomic data handling, and biomass concentration calculations, essential for plankton research.https://github.com/r-universe/europeanifcbgroup/actions/runs/39112896456Wed, 19 Aug 2026 19:21:31 GMTiRfcb0.10.0successhttps://europeanifcbgroup.r-universe.devhttps://github.com/europeanifcbgroup/irfcbintroduction.Rmdintroduction.htmliRfcb Introduction2025-12-29 18:59:412026-08-06 07:04:21